Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN05444358_10256 | Not Available | Negative | 1877985 - 1878878 | 33045.3 |
| dimethylglycine dehydrogenase | SAMN05444358_10257 | Not Available | Positive | 1879149 - 1881602 | 91211.8 |
| trimethylamine---corrinoid protein co-methyltransferase | SAMN05444358_10258 | Not Available | Positive | 1881618 - 1883138 | 55207.4 |
| delta1-piperideine-2-carboxylate reductase | SAMN05444358_10259 | Not Available | Positive | 1883200 - 1884213 | 35487.2 |
| d-amino-acid dehydrogenase | SAMN05444358_10260 | Not Available | Positive | 1884225 - 1885469 | 44347.4 |
| putative efflux protein, mate family | SAMN05444358_10261 | Not Available | Negative | 1885444 - 1886832 | 50541.2 |
| transcriptional regulator, xre family with cupin sensor | SAMN05444358_10262 | Not Available | Negative | 1886837 - 1887424 | 21635.7 |
| uncharacterized peroxidase-related enzyme | SAMN05444358_10263 | Not Available | Negative | 1887436 - 1888014 | 21228.8 |
| amino acid abc transporter atp-binding protein, paat family | SAMN05444358_10264 | Not Available | Positive | 1888135 - 1888881 | 28066.2 |
| amino acid abc transporter membrane protein 1, paat family | SAMN05444358_10265 | Not Available | Positive | 1888883 - 1889725 | 30911.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
