Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-amino-acid dehydrogenase | SAMN05444358_10235 | Not Available | Positive | 1857481 - 1858731 | 44574.7 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN05444358_10236 | Not Available | Positive | 1858784 - 1859761 | 34952.1 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05444358_10237 | Not Available | Positive | 1859833 - 1860366 | 19849.3 |
| trap transporter, dctm subunit | SAMN05444358_10238 | Not Available | Positive | 1860371 - 1861684 | 47412.7 |
| hypothetical protein | SAMN05444358_10239 | Not Available | Positive | 1861691 - 1862623 | 32941.1 |
| betaine/carnitine transporter, bcct family | SAMN05444358_10240 | Not Available | Positive | 1862794 - 1864380 | 56873.9 |
| udp-glucose dehydrogenase | SAMN05444358_10241 | Not Available | Negative | 1864447 - 1865778 | 47466.8 |
| blar1 peptidase m56 | SAMN05444358_10242 | Not Available | Negative | 1866052 - 1867149 | 40829.5 |
| predicted transcriptional regulator | SAMN05444358_10243 | Not Available | Negative | 1867136 - 1867531 | 14968.8 |
| predicted small integral membrane protein | SAMN05444358_10244 | Not Available | Negative | 1867598 - 1867999 | 14780.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
