Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoic acid synthetase | SAMN05444358_1024 | Not Available | Negative | 1828507 - 1829451 | 35076.9 |
| dihydrolipoamide dehydrogenase | SAMN05444358_1025 | Not Available | Negative | 1829465 - 1830844 | 47258.2 |
| serine hydroxymethyltransferase | SAMN05444358_1026 | Not Available | Negative | 1830856 - 1832109 | 44199.0 |
| transcriptional regulator, xre family with cupin sensor | SAMN05444358_1027 | Not Available | Positive | 1832257 - 1832859 | 22291.1 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05444358_1028 | Not Available | Positive | 1833114 - 1834073 | 34471.3 |
| proline racemase/4-hydroxyproline epimerase | SAMN05444358_1029 | Not Available | Positive | 1834064 - 1834996 | 33084.6 |
| transcriptional regulator, gntr family | SAMN05444358_10210 | Not Available | Positive | 1835206 - 1835889 | 25877.1 |
| putative molybdenum carrier | SAMN05444358_10211 | Not Available | Positive | 1835989 - 1836459 | 16549.8 |
| thiamine transport system atp-binding protein | SAMN05444358_10212 | Not Available | Negative | 1836447 - 1837139 | 24444.7 |
| thiamine transport system permease protein | SAMN05444358_10213 | Not Available | Negative | 1837126 - 1838673 | 54233.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
