Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| omega-6 fatty acid desaturase (delta-12 desaturase) | SAMN05444358_1011855 | Not Available | Negative | 1821968 - 1823002 | 39526.5 |
| lsu ribosomal protein l23p | SAMN05444358_1011856 | Not Available | Negative | 1823170 - 1823466 | 10753.1 |
| lsu ribosomal protein l4p | SAMN05444358_1011857 | Not Available | Negative | 1823463 - 1824080 | 22155.0 |
| lsu ribosomal protein l3p | SAMN05444358_1011858 | Not Available | Negative | 1824077 - 1824802 | 25255.4 |
| ssu ribosomal protein s10p | SAMN05444358_1011859 | Not Available | Negative | 1824821 - 1825135 | 11790.4 |
| hypothetical protein | SAMN05444358_1011860 | Not Available | Positive | 1825423 - 1826226 | 30235.0 |
| elongation factor tu | SAMN05444358_1011861 | Not Available | Negative | 1826391 - 1826495 | 3567.45 |
| aminomethyltransferase | SAMN05444358_1021 | Not Available | Negative | 1826496 - 1826590 | 3478.3 |
| universal stress protein f | SAMN05444358_1022 | Not Available | Negative | 1826607 - 1827029 | 15472.5 |
| alanine or glycine:cation symporter, agcs family | SAMN05444358_1023 | Not Available | Negative | 1827108 - 1828481 | 47138.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
