Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold-shock dna-binding protein family | SAMN05444358_1011845 | Not Available | Negative | 1815545 - 1815751 | 7212.47 |
| conserved hypothetical protein | SAMN05444358_1011846 | Not Available | Negative | 1815958 - 1816677 | 27125.1 |
| amino acid synthesis | SAMN05444358_1011847 | Not Available | Negative | 1816628 - 1817176 | 18797.8 |
| lsu ribosomal protein l16p | SAMN05444358_1011848 | Not Available | Negative | 1817340 - 1817753 | 15644.4 |
| ssu ribosomal protein s3p | SAMN05444358_1011849 | Not Available | Negative | 1817766 - 1818476 | 26779.7 |
| lsu ribosomal protein l22p | SAMN05444358_1011850 | Not Available | Negative | 1818476 - 1818856 | 14296.6 |
| ssu ribosomal protein s19p | SAMN05444358_1011851 | Not Available | Negative | 1818860 - 1819138 | 10488.6 |
| lsu ribosomal protein l2p | SAMN05444358_1011852 | Not Available | Negative | 1819142 - 1819984 | 30455.9 |
| hypothetical protein | SAMN05444358_1011853 | Not Available | Negative | 1820186 - 1821487 | 49385.8 |
| hypothetical protein | SAMN05444358_1011854 | Not Available | Negative | 1821713 - 1821925 | 7768.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
