Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l18p | SAMN05444358_1011835 | Not Available | Negative | 1811348 - 1811707 | 12952.8 |
| lsu ribosomal protein l6p | SAMN05444358_1011836 | Not Available | Negative | 1811719 - 1812252 | 19550.6 |
| ssu ribosomal protein s8p | SAMN05444358_1011837 | Not Available | Negative | 1812265 - 1812657 | 14183.1 |
| ssu ribosomal protein s14p | SAMN05444358_1011838 | Not Available | Negative | 1812671 - 1812976 | 11678.5 |
| lsu ribosomal protein l5p | SAMN05444358_1011839 | Not Available | Negative | 1812996 - 1813556 | 20632.1 |
| lsu ribosomal protein l24p | SAMN05444358_1011840 | Not Available | Negative | 1813549 - 1813860 | 10845.2 |
| lsu ribosomal protein l14p | SAMN05444358_1011841 | Not Available | Negative | 1813863 - 1814231 | 13455.6 |
| ssu ribosomal protein s17p | SAMN05444358_1011842 | Not Available | Negative | 1814308 - 1814538 | 8682.57 |
| lsu ribosomal protein l29p | SAMN05444358_1011843 | Not Available | Negative | 1814543 - 1814749 | 7560.92 |
| hypothetical protein | SAMN05444358_1011844 | Not Available | Positive | 1815104 - 1815475 | 13174.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
