Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperone required for the assembly of the f1-atpase | SAMN05444358_1011814 | Not Available | Negative | 1794608 - 1795315 | 26429.2 |
| phosphoglycolate phosphatase | SAMN05444358_1011815 | Not Available | Negative | 1795320 - 1795991 | 23795.5 |
| ribosomal large subunit pseudouridine synthase c | SAMN05444358_1011816 | Not Available | Negative | 1795988 - 1797031 | 37973.5 |
| recombination protein mgsa | SAMN05444358_1011817 | Not Available | Negative | 1797136 - 1798449 | 48196.5 |
| do/deqq family serine protease | SAMN05444358_1011818 | Not Available | Negative | 1798453 - 1799838 | 48073.8 |
| acetolactate decarboxylase | SAMN05444358_1011819 | Not Available | Positive | 1799984 - 1800772 | 28818.9 |
| lsu ribosomal protein l17p | SAMN05444358_1011820 | Not Available | Negative | 1800861 - 1801283 | 15893.2 |
| dna-directed rna polymerase subunit alpha | SAMN05444358_1011821 | Not Available | Negative | 1801402 - 1802418 | 37046.1 |
| ssu ribosomal protein s11p | SAMN05444358_1011822 | Not Available | Negative | 1802534 - 1802923 | 13816.5 |
| ssu ribosomal protein s13p | SAMN05444358_1011823 | Not Available | Negative | 1802938 - 1803306 | 13521.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
