Ruegeria halocynthiae

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Ruegeria

Description

Ruegeria halocynthiae is a Gram-negative, non-motile bacterial species characterized by its rod-shaped morphology. This organism thrives in mesophilic conditions with an optimal growth temperature of 29°C, indicating its preference for moderate temperature environments. R. halocynthiae has a singular replicon, which is a notable trait for its genetic organization. The genome of this bacterium can be accessed through the accession number FNNP00000000.1, providing a resource for further genomic and functional studies. From a biological and ecological perspective, the adaptations of Ruegeria halocynthiae to its mesophilic environment may suggest its role in marine ecosystems, particularly in interactions with marine organisms. Its Gram-negative nature may also play a role in its ecological interactions, such as nutrient cycling or symbiotic relationships, although specific interactions are not detailed in the provided traits. Understanding the growth conditions and genetic framework of R. halocynthiae could provide insights into its ecological niches and potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRuegeria
SpeciesRuegeria halocynthiae
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative / gram-positive
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Crambe crambe
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruegeria halocynthiae strain DSM 27839 genome assembly, contig:

Gene Summary

Adenine Count

921858 bp

Thymine Count

924279 bp

Guanine Count

1199491 bp

Cytosine Count

1198040 bp

Genome Length

4243668 bp

Protein-coding Genes

4188 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein translocase subunit yidcSAMN05444358_1011804Not AvailablePositive1784475 - 178629867564.2
hypothetical proteinSAMN05444358_1011805Not AvailablePositive1786295 - 178703227027.0
gtp-binding proteinSAMN05444358_1011806Not AvailablePositive1787029 - 178768223722.8
n-acetylglutamate kinaseSAMN05444358_1011807Not AvailablePositive1787743 - 178860630115.7
hypothetical proteinSAMN05444358_1011808Not AvailablePositive1788628 - 178932925128.9
phosphohistidine phosphataseSAMN05444358_1011809Not AvailablePositive1789326 - 178988020282.1
l-glutamine abc transporter atp-binding protein /l-glutamate abc transporter atp-binding protein /l-aspartate abc transporter atp-binding protein /l-asparagine abc transporter atp-binding proteinSAMN05444358_1011810Not AvailableNegative1789877 - 179066829916.2
l-glutamine abc transporter membrane protein /l-glutamate abc transporter membrane protein /l-aspartate abc transporter membrane protein /l-asparagine abc transporter membrane proteinSAMN05444358_1011811Not AvailableNegative1790681 - 179198548003.1
l-glutamine abc transporter membrane protein /l-glutamate abc transporter membrane protein /l-aspartate abc transporter membrane protein /l-asparagine abc transporter membrane proteinSAMN05444358_1011812Not AvailableNegative1791987 - 179325546470.9
l-glutamine-binding protein /l-glutamate-binding protein /l-aspartate-binding protein /l-asparagine-binding proteinSAMN05444358_1011813Not AvailableNegative1793385 - 179440135451.7

Displaying genes 1801 – 1810 of 4253 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.