Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sir2-like domain-containing protein | SAMN05444358_1011794 | Not Available | Negative | 1775373 - 1776302 | 34461.0 |
| Trna-arg | Not Available | Not Available | Positive | 1776999 - 1777075 | Not Available |
| hypothetical protein | SAMN05444358_1011796 | Not Available | Negative | 1777140 - 1778522 | 50691.6 |
| pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (e3) component | SAMN05444358_1011797 | Not Available | Negative | 1778541 - 1779959 | 50354.9 |
| uncharacterized membrane protein ydjx, tvp38/tmem64 family, snare-associated domain | SAMN05444358_1011798 | Not Available | Negative | 1779963 - 1780757 | 28220.9 |
| lsu ribosomal protein l34p | SAMN05444358_1011799 | Not Available | Positive | 1780992 - 1781126 | 5153.46 |
| ribonuclease p protein component | SAMN05444358_1011800 | Not Available | Positive | 1781152 - 1781574 | 15294.5 |
| hypothetical protein | SAMN05444358_1011801 | Not Available | Positive | 1781571 - 1781798 | 8381.17 |
| trna 2-thiocytidine biosynthesis protein ttca | SAMN05444358_1011802 | Not Available | Positive | 1781843 - 1782736 | 33643.6 |
| diguanylate cyclase/phosphodiesterase | SAMN05444358_1011803 | Not Available | Positive | 1782807 - 1784348 | 56561.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
