Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter substrate-binding protein, cut1 family | SAMN05444358_1011774 | Not Available | Negative | 1758481 - 1759740 | 45498.4 |
| cystathionine beta-lyase/cystathionine gamma-synthase | SAMN05444358_1011775 | Not Available | Negative | 1759784 - 1760935 | 41559.7 |
| transcriptional regulator, gntr family | SAMN05444358_1011776 | Not Available | Negative | 1760928 - 1761677 | 27154.5 |
| hypothetical protein | SAMN05444358_1011777 | Not Available | Negative | 1762267 - 1762776 | 18693.0 |
| transcriptional regulator, tetr family | SAMN05444358_1011778 | Not Available | Negative | 1762773 - 1763318 | 20021.1 |
| hypothetical protein | SAMN05444358_1011779 | Not Available | Negative | 1763318 - 1763695 | 13728.1 |
| predicted arabinose efflux permease, mfs family | SAMN05444358_1011780 | Not Available | Negative | 1763943 - 1765124 | 39948.9 |
| transcriptional regulator, deor family | SAMN05444358_1011781 | Not Available | Negative | 1765121 - 1765879 | 26423.7 |
| lactoylglutathione lyase | SAMN05444358_1011782 | Not Available | Positive | 1765965 - 1766345 | 14194.5 |
| protein of unknown function | SAMN05444358_1011783 | Not Available | Negative | 1766680 - 1767144 | 16830.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
