Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN05444358_1011764 | Not Available | Negative | 1748653 - 1749663 | 36549.1 |
| predicted dehydrogenase | SAMN05444358_1011765 | Not Available | Negative | 1749716 - 1750843 | 41499.6 |
| transcriptional regulator, gntr family | SAMN05444358_1011766 | Not Available | Positive | 1751052 - 1751705 | 24685.6 |
| hypothetical protein | SAMN05444358_1011767 | Not Available | Negative | 1751833 - 1752162 | 12292.9 |
| ketosteroid isomerase homolog | SAMN05444358_1011768 | Not Available | Negative | 1752494 - 1752880 | 13949.5 |
| n-acylglucosamine 2-epimerase (glcnac 2-epimerase) | SAMN05444358_1011769 | Not Available | Negative | 1752877 - 1753224 | 12866.2 |
| pyruvate dehydrogenase e1 component | SAMN05444358_1011770 | Not Available | Negative | 1753228 - 1755615 | 86664.5 |
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN05444358_1011771 | Not Available | Negative | 1755617 - 1756684 | 38571.4 |
| carbohydrate abc transporter membrane protein 2, cut1 family | SAMN05444358_1011772 | Not Available | Negative | 1756696 - 1757538 | 30683.4 |
| carbohydrate abc transporter membrane protein 1, cut1 family | SAMN05444358_1011773 | Not Available | Negative | 1757549 - 1758499 | 35653.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
