Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetolactate synthase-1/2/3 large subunit | SAMN05444358_1011754 | Not Available | Negative | 1736775 - 1738556 | 63762.2 |
| sulfoacetaldehyde dehydrogenase | SAMN05444358_1011755 | Not Available | Negative | 1738556 - 1739965 | 51395.2 |
| sugar phosphate isomerase/epimerase | SAMN05444358_1011756 | Not Available | Negative | 1739946 - 1740860 | 33892.3 |
| predicted dehydrogenase | SAMN05444358_1011757 | Not Available | Negative | 1741015 - 1742205 | 43160.2 |
| hypothetical protein | SAMN05444358_1011758 | Not Available | Negative | 1742198 - 1742872 | 25372.1 |
| predicted dehydrogenase | SAMN05444358_1011759 | Not Available | Negative | 1742862 - 1744052 | 43547.8 |
| citrate synthase | SAMN05444358_1011760 | Not Available | Negative | 1744039 - 1744866 | 29676.4 |
| 4-hydroxyphenylpyruvate dioxygenase | SAMN05444358_1011761 | Not Available | Negative | 1744863 - 1746755 | 68879.0 |
| trap transporter, dctm subunit | SAMN05444358_1011762 | Not Available | Negative | 1746755 - 1748050 | 45440.7 |
| c4-dicarboxylate transporter, dctq subunit | SAMN05444358_1011763 | Not Available | Negative | 1748047 - 1748622 | 22006.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
