Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444358_1011744 | Not Available | Positive | 1726990 - 1727259 | 9956.96 |
| hypothetical protein | SAMN05444358_1011745 | Not Available | Positive | 1727496 - 1728158 | 24589.4 |
| c4-dicarboxylate transporter, dctm subunit | SAMN05444358_1011746 | Not Available | Negative | 1728608 - 1730026 | 49637.1 |
| c4-dicarboxylate transporter, dctq subunit | SAMN05444358_1011747 | Not Available | Negative | 1730026 - 1730691 | 24924.4 |
| c4-dicarboxylate-binding protein dctp | SAMN05444358_1011748 | Not Available | Negative | 1730761 - 1731762 | 36576.4 |
| haloacetate dehalogenase | SAMN05444358_1011749 | Not Available | Positive | 1731932 - 1732837 | 34442.9 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase large subunit | SAMN05444358_1011750 | Not Available | Positive | 1732834 - 1734228 | 49718.1 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase small subunit | SAMN05444358_1011751 | Not Available | Positive | 1734230 - 1734835 | 22340.6 |
| dna-binding transcriptional regulator, lysr family | SAMN05444358_1011752 | Not Available | Positive | 1734851 - 1735762 | 33561.1 |
| hypothetical protein | SAMN05444358_1011753 | Not Available | Negative | 1736442 - 1736657 | 8140.92 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
