Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heparinase ii/iii-like protein | SAMN05444358_1011734 | Not Available | Positive | 1714547 - 1716529 | 72818.7 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN05444358_1011735 | Not Available | Negative | 1716604 - 1719732 | 112142.0 |
| membrane fusion protein, multidrug efflux system | SAMN05444358_1011736 | Not Available | Negative | 1719741 - 1720844 | 38981.9 |
| hypothetical protein | SAMN05444358_1011737 | Not Available | Negative | 1721240 - 1721701 | 16773.6 |
| hypothetical protein | SAMN05444358_1011738 | Not Available | Negative | 1721794 - 1722360 | 19602.0 |
| hypothetical protein | SAMN05444358_1011739 | Not Available | Negative | 1722424 - 1723050 | 22387.3 |
| mosc domain-containing protein yiim | SAMN05444358_1011740 | Not Available | Negative | 1724338 - 1725036 | 25374.8 |
| transcriptional regulator, marr family | SAMN05444358_1011741 | Not Available | Negative | 1725033 - 1725452 | 15349.3 |
| hypothetical protein | SAMN05444358_1011742 | Not Available | Positive | 1725665 - 1726414 | 25667.8 |
| peroxiredoxin | SAMN05444358_1011743 | Not Available | Positive | 1726473 - 1726997 | 18828.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
