Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | SAMN05444358_1011724 | Not Available | Negative | 1696885 - 1697289 | 14537.4 |
| hypothetical protein | SAMN05444358_1011725 | Not Available | Negative | 1697371 - 1697682 | 11803.5 |
| hypothetical protein | SAMN05444358_1011726 | Not Available | Negative | 1697754 - 1698404 | 23055.1 |
| hypothetical protein | SAMN05444358_1011727 | Not Available | Negative | 1699235 - 1701211 | 73513.8 |
| putative transposase | SAMN05444358_1011728 | Not Available | Positive | 1701360 - 1701989 | 23741.0 |
| tolb amino-terminal domain-containing protein | SAMN05444358_1011729 | Not Available | Negative | 1702155 - 1703861 | 63088.8 |
| alkyl sulfatase bds1, metallo-beta-lactamase superfamily | SAMN05444358_1011730 | Not Available | Positive | 1704165 - 1706219 | 75633.0 |
| response regulator receiver domain-containing protein | SAMN05444358_1011731 | Not Available | Negative | 1706452 - 1707477 | 37411.0 |
| hpt domain-containing protein | SAMN05444358_1011732 | Not Available | Negative | 1707470 - 1707811 | 11853.9 |
| gaf domain-containing protein | SAMN05444358_1011733 | Not Available | Negative | 1707815 - 1713718 | 215808.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
