Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted flavoprotein czco associated with the cation diffusion facilitator czcd | SAMN05444358_1011714 | Not Available | Negative | 1685451 - 1686926 | 54293.2 |
| transcriptional regulator, paax family | SAMN05444358_1011715 | Not Available | Negative | 1687018 - 1687818 | 29476.2 |
| oxepin-coa hydrolase / 3-oxo-5,6-dehydrosuberyl-coa semialdehyde dehydrogenase | SAMN05444358_1011716 | Not Available | Negative | 1687872 - 1689896 | 72181.3 |
| trap transporter, dctm subunit | SAMN05444358_1011717 | Not Available | Negative | 1689925 - 1691277 | 47584.9 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05444358_1011718 | Not Available | Negative | 1691274 - 1691780 | 18472.3 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN05444358_1011719 | Not Available | Negative | 1691835 - 1692854 | 35899.5 |
| enoyl-coa hydratase | SAMN05444358_1011720 | Not Available | Positive | 1693037 - 1693840 | 28258.7 |
| acyl-coa thioesterase | SAMN05444358_1011721 | Not Available | Positive | 1693842 - 1694270 | 15153.8 |
| phenylacetate-coa ligase | SAMN05444358_1011722 | Not Available | Positive | 1694286 - 1695593 | 48405.8 |
| transcriptional regulator, tetr family | SAMN05444358_1011723 | Not Available | Positive | 1695615 - 1696211 | 22445.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
