Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyacyl-coa dehydrogenase | SAMN05444358_1011694 | Not Available | Negative | 1666273 - 1668366 | 75186.6 |
| site-specific recombinase xerd | SAMN05444358_1011695 | Not Available | Negative | 1668902 - 1670083 | 45276.1 |
| caspase domain-containing protein | SAMN05444358_1011696 | Not Available | Positive | 1670352 - 1671773 | 52989.9 |
| hypothetical protein | SAMN05444358_1011697 | Not Available | Positive | 1671967 - 1672485 | 19341.0 |
| hypothetical protein | SAMN05444358_1011698 | Not Available | Positive | 1672485 - 1672958 | 17206.4 |
| hypothetical protein | SAMN05444358_1011699 | Not Available | Positive | 1672940 - 1673194 | 9706.45 |
| hypothetical protein | SAMN05444358_1011700 | Not Available | Positive | 1673191 - 1673403 | 7957.62 |
| hypothetical protein | SAMN05444358_1011701 | Not Available | Positive | 1673634 - 1674023 | 14542.9 |
| hypothetical protein | SAMN05444358_1011702 | Not Available | Positive | 1674369 - 1674515 | 5201.35 |
| hypothetical protein | SAMN05444358_1011703 | Not Available | Positive | 1674515 - 1674985 | 17200.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
