Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coa-transferase family iii | SAMN05444358_1011684 | Not Available | Positive | 1654065 - 1655420 | 48536.0 |
| small-conductance mechanosensitive channel | SAMN05444358_1011685 | Not Available | Negative | 1655507 - 1657900 | 88216.9 |
| predicted glycosyl transferase | SAMN05444358_1011686 | Not Available | Positive | 1658281 - 1659495 | 44476.3 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444358_1011687 | Not Available | Positive | 1659492 - 1660739 | 46292.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444358_1011688 | Not Available | Positive | 1660739 - 1661815 | 39542.6 |
| probable phosphoglycerate mutase | SAMN05444358_1011689 | Not Available | Positive | 1661812 - 1662390 | 21647.8 |
| predicted glycosyl transferase | SAMN05444358_1011690 | Not Available | Positive | 1662393 - 1663535 | 40383.5 |
| hypothetical protein | SAMN05444358_1011691 | Not Available | Positive | 1663532 - 1664275 | 27516.9 |
| s-adenosyl-l-methionine methyltransferase | SAMN05444358_1011692 | Not Available | Positive | 1664295 - 1664771 | 17657.3 |
| ribulose-5-phosphate 3-epimerase | SAMN05444358_1011693 | Not Available | Positive | 1665467 - 1666156 | 24059.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
