Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| indolepyruvate ferredoxin oxidoreductase | SAMN05444358_1011674 | Not Available | Positive | 1638484 - 1641879 | 124157.0 |
| transcriptional regulator, tetr family | SAMN05444358_1011675 | Not Available | Negative | 1642014 - 1642697 | 26120.2 |
| trimethylamine---corrinoid protein co-methyltransferase | SAMN05444358_1011676 | Not Available | Negative | 1642698 - 1644242 | 56025.4 |
| dimethylglycine dehydrogenase | SAMN05444358_1011677 | Not Available | Negative | 1644245 - 1646647 | 88557.4 |
| glutathione s-transferase | SAMN05444358_1011678 | Not Available | Negative | 1646746 - 1647375 | 23025.4 |
| s-adenosyl-l-methionine methyltransferase | SAMN05444358_1011679 | Not Available | Negative | 1647468 - 1647965 | 18186.7 |
| peptide/nickel transport system atp-binding protein | SAMN05444358_1011680 | Not Available | Positive | 1648196 - 1649968 | 64428.8 |
| peptide/nickel transport system substrate-binding protein | SAMN05444358_1011681 | Not Available | Positive | 1649961 - 1651874 | 71692.7 |
| peptide/nickel transport system permease protein | SAMN05444358_1011682 | Not Available | Positive | 1651889 - 1652917 | 37996.3 |
| peptide/nickel transport system permease protein | SAMN05444358_1011683 | Not Available | Positive | 1652914 - 1654068 | 42870.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
