Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444358_1011664 | Not Available | Positive | 1628075 - 1628902 | 30582.7 |
| l-threonine ammonia-lyase | SAMN05444358_1011665 | Not Available | Positive | 1628899 - 1629873 | 33989.7 |
| 3-oxoadipate enol-lactonase | SAMN05444358_1011666 | Not Available | Positive | 1629947 - 1630735 | 28587.6 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444358_1011667 | Not Available | Positive | 1630745 - 1631461 | 26205.3 |
| hypothetical protein | SAMN05444358_1011668 | Not Available | Negative | 1631392 - 1631694 | 11339.9 |
| zn-dependent alcohol dehydrogenase | SAMN05444358_1011669 | Not Available | Positive | 1631808 - 1632902 | 37740.8 |
| l-alanine-dl-glutamate epimerase | SAMN05444358_1011670 | Not Available | Positive | 1632924 - 1634156 | 44961.1 |
| abc-type multidrug transport system, atpase and permease component | SAMN05444358_1011671 | Not Available | Negative | 1634273 - 1637314 | 112167.0 |
| protein of unknown function | SAMN05444358_1011672 | Not Available | Positive | 1637484 - 1637873 | 14590.0 |
| dna-binding transcriptional regulator, lrp family | SAMN05444358_1011673 | Not Available | Negative | 1637877 - 1638338 | 17312.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
