Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444358_1011633 | Not Available | Positive | 1600295 - 1601458 | 43034.2 |
| hypothetical protein | SAMN05444358_1011634 | Not Available | Positive | 1601468 - 1601848 | 13896.4 |
| methyltransferase domain-containing protein | SAMN05444358_1011635 | Not Available | Negative | 1601845 - 1602477 | 23367.9 |
| tryptophan synthase, beta chain | SAMN05444358_1011636 | Not Available | Negative | 1602522 - 1603769 | 45403.5 |
| phosphoribosylanthranilate isomerase | SAMN05444358_1011637 | Not Available | Negative | 1603870 - 1604514 | 22927.5 |
| protein of unknown function | SAMN05444358_1011638 | Not Available | Negative | 1604524 - 1604877 | 13154.4 |
| integration host factor subunit beta | SAMN05444358_1011639 | Not Available | Negative | 1604882 - 1605166 | 10807.0 |
| ssu ribosomal protein s1p | SAMN05444358_1011640 | Not Available | Negative | 1605437 - 1607113 | 61269.6 |
| tryptophan halogenase | SAMN05444358_1011641 | Not Available | Negative | 1607520 - 1609205 | 63510.2 |
| yhs domain-containing protein | SAMN05444358_1011642 | Not Available | Positive | 1609643 - 1610119 | 16535.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
