Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent formate dehydrogenase catalytic subunit /nad-dependent formate dehydrogenase iron-sulfur protein | SAMN05444358_1011623 | Not Available | Negative | 1588466 - 1591249 | 102054.0 |
| nad-dependent formate dehydrogenase flavoprotein subunit | SAMN05444358_1011624 | Not Available | Negative | 1591263 - 1592966 | 61669.3 |
| transcriptional regulator, lysr family | SAMN05444358_1011625 | Not Available | Negative | 1593052 - 1593933 | 32301.6 |
| acetyltransferase (gnat) domain-containing protein | SAMN05444358_1011626 | Not Available | Negative | 1594003 - 1594512 | 18611.0 |
| hypothetical protein | SAMN05444358_1011627 | Not Available | Negative | 1594520 - 1595617 | 39530.2 |
| lipid a 3-o-deacylase (pagl) | SAMN05444358_1011628 | Not Available | Positive | 1595820 - 1596305 | 17298.0 |
| tryptophan synthase, alpha chain | SAMN05444358_1011629 | Not Available | Positive | 1596385 - 1597176 | 27530.7 |
| l-lactate dehydrogenase (cytochrome) | SAMN05444358_1011630 | Not Available | Positive | 1597340 - 1598506 | 42664.3 |
| lsu ribosomal protein l25p | SAMN05444358_1011631 | Not Available | Positive | 1598757 - 1599410 | 23655.3 |
| peptidyl-trna hydrolase | SAMN05444358_1011632 | Not Available | Positive | 1599541 - 1600224 | 24813.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
