Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444358_1011613 | Not Available | Positive | 1574814 - 1575137 | 11589.0 |
| glyceraldehyde 3-phosphate dehydrogenase | SAMN05444358_1011614 | Not Available | Positive | 1575192 - 1576181 | 34620.7 |
| nucleobase:cation symporter-2, ncs2 family | SAMN05444358_1011615 | Not Available | Negative | 1576222 - 1577649 | 48737.8 |
| ureidoglycolate lyase | SAMN05444358_1011616 | Not Available | Negative | 1577717 - 1578202 | 17895.1 |
| ohcu decarboxylase | SAMN05444358_1011617 | Not Available | Negative | 1578199 - 1579617 | 52811.1 |
| 5-hydroxyisourate hydrolase | SAMN05444358_1011618 | Not Available | Positive | 1579781 - 1580137 | 13119.4 |
| transcriptional regulator, lysr family | SAMN05444358_1011619 | Not Available | Negative | 1580140 - 1581054 | 33805.6 |
| uncharacterized membrane protein | SAMN05444358_1011620 | Not Available | Positive | 1581150 - 1582373 | 46250.2 |
| autotransporter secretion outer membrane protein tama | SAMN05444358_1011621 | Not Available | Positive | 1582527 - 1584332 | 64905.2 |
| autotransporter secretion inner membrane protein tamb | SAMN05444358_1011622 | Not Available | Positive | 1584332 - 1588414 | 139953.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
