Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | SAMN05444358_1011603 | Not Available | Negative | 1565764 - 1566753 | 35040.8 |
| ribosomal protein s18 acetylase rimi | SAMN05444358_1011604 | Not Available | Negative | 1566746 - 1567201 | 16955.1 |
| hypothetical protein | SAMN05444358_1011605 | Not Available | Negative | 1567198 - 1568613 | 52036.1 |
| trna pseudouridine38-40 synthase | SAMN05444358_1011606 | Not Available | Positive | 1568723 - 1569490 | 28468.9 |
| abc-type nickel/cobalt efflux system, permease component rcna | SAMN05444358_1011607 | Not Available | Negative | 1569493 - 1570428 | 33014.4 |
| abc-type uncharacterized transport system, substrate-binding protein | SAMN05444358_1011608 | Not Available | Negative | 1570413 - 1571060 | 23761.0 |
| acyl-coa thioesterase | SAMN05444358_1011609 | Not Available | Negative | 1571131 - 1571931 | 28555.2 |
| acyl-coa dehydrogenase | SAMN05444358_1011610 | Not Available | Negative | 1571947 - 1573182 | 46244.6 |
| hypothetical protein | SAMN05444358_1011611 | Not Available | Negative | 1573346 - 1573702 | 12607.0 |
| (s)-ureidoglycine aminohydrolase | SAMN05444358_1011612 | Not Available | Positive | 1573879 - 1574712 | 31144.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
