Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| selenocysteine lyase/cysteine desulfurase | SAMN05444358_1011592 | Not Available | Negative | 1557144 - 1558559 | 50977.2 |
| transcriptional regulator, asnc family | SAMN05444358_1011593 | Not Available | Positive | 1558663 - 1559124 | 17601.4 |
| ssu ribosomal protein s4p | SAMN05444358_1011594 | Not Available | Negative | 1559247 - 1559867 | 23378.2 |
| hypothetical protein | SAMN05444358_1011595 | Not Available | Negative | 1560078 - 1560434 | 12662.0 |
| cobalt/nickel transport protein | SAMN05444358_1011597 | Not Available | Positive | 1561531 - 1562316 | 28421.7 |
| cobalt/nickel transport system permease protein | SAMN05444358_1011598 | Not Available | Positive | 1562323 - 1562934 | 20594.9 |
| nickel transport protein | SAMN05444358_1011599 | Not Available | Positive | 1562931 - 1563512 | 20299.5 |
| cobalt/nickel transport system permease protein | SAMN05444358_1011600 | Not Available | Positive | 1563512 - 1564294 | 29033.0 |
| cobalt/nickel transport system atp-binding protein | SAMN05444358_1011601 | Not Available | Positive | 1564291 - 1564947 | 23923.0 |
| predicted fe2+/mn2+ transporter, vit1/ccc1 family | SAMN05444358_1011602 | Not Available | Negative | 1564999 - 1565709 | 25209.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
