Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-hydroxychromene-2-carboxylate isomerase | SAMN05444358_1011572 | Not Available | Negative | 1536782 - 1537381 | 22188.3 |
| ribose-phosphate pyrophosphokinase | SAMN05444358_1011573 | Not Available | Positive | 1537490 - 1538509 | 37336.3 |
| nitroreductase | SAMN05444358_1011574 | Not Available | Negative | 1538546 - 1539238 | 26302.3 |
| h-type lectin domain-containing protein | SAMN05444358_1011575 | Not Available | Negative | 1539329 - 1539679 | 13065.2 |
| atp synthase f1 subcomplex epsilon subunit | SAMN05444358_1011576 | Not Available | Negative | 1539790 - 1540200 | 14242.8 |
| atp synthase f1 subcomplex beta subunit | SAMN05444358_1011577 | Not Available | Negative | 1540213 - 1541637 | 50370.1 |
| f-type h+-transporting atpase subunit gamma | SAMN05444358_1011578 | Not Available | Negative | 1541658 - 1542542 | 31627.8 |
| atp synthase f1 subcomplex alpha subunit | SAMN05444358_1011579 | Not Available | Negative | 1542558 - 1544096 | 54960.7 |
| atp synthase f1 subcomplex delta subunit | SAMN05444358_1011580 | Not Available | Negative | 1544097 - 1544621 | 18690.8 |
| methyltransferase domain-containing protein | SAMN05444358_1011581 | Not Available | Negative | 1544960 - 1545694 | 27115.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
