Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperonin groel | SAMN05444358_1011562 | Not Available | Negative | 1527684 - 1529327 | 57704.4 |
| chaperonin groes | SAMN05444358_1011563 | Not Available | Negative | 1529382 - 1529669 | 10184.3 |
| hypothetical protein | SAMN05444358_1011564 | Not Available | Negative | 1529841 - 1530515 | 24843.9 |
| hypothetical protein | SAMN05444358_1011565 | Not Available | Positive | 1530637 - 1531617 | 36448.6 |
| manganese-dependent inorganic pyrophosphatase | SAMN05444358_1011566 | Not Available | Positive | 1531717 - 1532637 | 32825.3 |
| had-superfamily class iia hydrolase, tigr01459 | SAMN05444358_1011567 | Not Available | Positive | 1532847 - 1533722 | 31647.4 |
| 3-hydroxybutyryl-coa dehydratase | SAMN05444358_1011568 | Not Available | Positive | 1533823 - 1534266 | 16315.9 |
| fmn adenylyltransferase /riboflavin kinase | SAMN05444358_1011569 | Not Available | Positive | 1534327 - 1535259 | 33641.2 |
| hypothetical protein | SAMN05444358_1011570 | Not Available | Positive | 1535256 - 1535729 | 18135.3 |
| l-threonine aldolase | SAMN05444358_1011571 | Not Available | Positive | 1535729 - 1536763 | 37489.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
