Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenazine biosynthesis protein phzf family | SAMN05444358_1011552 | Not Available | Negative | 1520271 - 1521149 | 30660.9 |
| hypothetical protein | SAMN05444358_1011553 | Not Available | Negative | 1521237 - 1521461 | 8224.75 |
| molecular chaperone ibpa, hsp20 family | SAMN05444358_1011554 | Not Available | Negative | 1521467 - 1521880 | 15406.5 |
| hypothetical protein | SAMN05444358_1011555 | Not Available | Positive | 1522046 - 1522270 | 8638.62 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | SAMN05444358_1011556 | Not Available | Positive | 1522312 - 1522833 | 17871.7 |
| pyrroline-5-carboxylate reductase | SAMN05444358_1011557 | Not Available | Positive | 1522830 - 1523585 | 26395.8 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | SAMN05444358_1011558 | Not Available | Positive | 1523588 - 1524661 | 38439.9 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | SAMN05444358_1011559 | Not Available | Negative | 1524718 - 1525869 | 41197.5 |
| triacylglycerol esterase/lipase esta, alpha/beta hydrolase fold | SAMN05444358_1011560 | Not Available | Negative | 1525866 - 1526639 | 27790.3 |
| threonine/homoserine efflux transporter rhta | SAMN05444358_1011561 | Not Available | Negative | 1526678 - 1527520 | 28463.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
