Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-ketodecanoyl-[acyl-carrier-protein] synthase | SAMN05444358_1011532 | Not Available | Positive | 1503300 - 1504421 | 40782.2 |
| hypothetical protein | SAMN05444358_1011533 | Not Available | Positive | 1504545 - 1505243 | 21981.3 |
| hypothetical protein | SAMN05444358_1011534 | Not Available | Negative | 1505368 - 1505928 | 20377.3 |
| thymidine kinase | SAMN05444358_1011535 | Not Available | Positive | 1506188 - 1506766 | 21220.4 |
| lactate dehydrogenase | SAMN05444358_1011536 | Not Available | Negative | 1506763 - 1507713 | 33959.1 |
| pp_01507 | SAMN05444358_1011537 | Not Available | Negative | 1507713 - 1508051 | Not Available |
| pyrroline-5-carboxylate reductase | SAMN05444358_1011538 | Not Available | Negative | 1508044 - 1508859 | 27916.7 |
| hypothetical protein | SAMN05444358_1011539 | Not Available | Negative | 1508893 - 1509393 | 19124.4 |
| hypothetical protein | SAMN05444358_1011540 | Not Available | Negative | 1509709 - 1509957 | 9364.2 |
| prolipoprotein diacylglyceryl transferase | SAMN05444358_1011541 | Not Available | Positive | 1510055 - 1510942 | 32533.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
