Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator receiver domain-containing protein | SAMN05444358_1011522 | Not Available | Positive | 1489804 - 1490520 | 25677.7 |
| hypothetical protein | SAMN05444358_1011523 | Not Available | Positive | 1490522 - 1490641 | 4597.66 |
| aspartyl-trna synthetase | SAMN05444358_1011524 | Not Available | Negative | 1490754 - 1492529 | 66449.0 |
| caax protease self-immunity | SAMN05444358_1011525 | Not Available | Negative | 1492608 - 1493243 | 24158.1 |
| 4-amino-4-deoxychorismate lyase | SAMN05444358_1011526 | Not Available | Negative | 1493276 - 1493923 | 23905.9 |
| aminodeoxychorismate synthase, subunit i | SAMN05444358_1011527 | Not Available | Negative | 1493878 - 1494999 | 40867.6 |
| carbamoyl-phosphate synthase large subunit | SAMN05444358_1011528 | Not Available | Positive | 1495183 - 1498527 | 121095.0 |
| multidrug efflux pump subunit acrb | SAMN05444358_1011529 | Not Available | Negative | 1498582 - 1501632 | 110085.0 |
| rnd family efflux transporter, mfp subunit | SAMN05444358_1011530 | Not Available | Negative | 1501644 - 1502681 | 36842.9 |
| transcriptional regulator, marr family | SAMN05444358_1011531 | Not Available | Negative | 1502669 - 1503145 | 17518.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
