Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444358_1011512 | Not Available | Negative | 1485263 - 1485520 | 9377.21 |
| hypothetical protein | SAMN05444358_1011513 | Not Available | Negative | 1485525 - 1485767 | 9122.72 |
| hypothetical protein | SAMN05444358_1011514 | Not Available | Negative | 1485804 - 1486055 | 9287.06 |
| uncharacterized protein family upf0029 | SAMN05444358_1011515 | Not Available | Negative | 1486124 - 1486492 | 13263.9 |
| peptidase family m48 | SAMN05444358_1011516 | Not Available | Negative | 1486492 - 1487193 | 25622.9 |
| hypothetical protein | SAMN05444358_1011517 | Not Available | Positive | 1487314 - 1487562 | 9216.82 |
| nitroreductase | SAMN05444358_1011518 | Not Available | Positive | 1487708 - 1488286 | 20781.9 |
| uncharacterized protein involved in cysteine biosynthesis | SAMN05444358_1011519 | Not Available | Positive | 1488283 - 1488981 | 25461.1 |
| predicted secreted protein | SAMN05444358_1011520 | Not Available | Negative | 1488983 - 1489258 | 10039.6 |
| methylmalonyl-coa epimerase /ethylmalonyl-coa epimerase | SAMN05444358_1011521 | Not Available | Negative | 1489264 - 1489668 | 14406.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
