Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase | SAMN05444358_1011502 | Not Available | Negative | 1475259 - 1475843 | 21875.2 |
| capsular polysaccharide transport system atp-binding protein | SAMN05444358_1011503 | Not Available | Positive | 1476056 - 1476715 | 24618.7 |
| capsular polysaccharide transport system permease protein | SAMN05444358_1011504 | Not Available | Positive | 1476693 - 1478279 | 58563.6 |
| 2-dehydro-3-deoxyphosphooctonate aldolase (kdo 8-p synthase) | SAMN05444358_1011505 | Not Available | Positive | 1478285 - 1479118 | 29394.4 |
| phosphomannomutase / phosphoglucomutase | SAMN05444358_1011506 | Not Available | Positive | 1479134 - 1480630 | 54188.8 |
| asma protein | SAMN05444358_1011507 | Not Available | Negative | 1480681 - 1482609 | 67883.2 |
| ssu ribosomal protein s12p methylthiotransferase | SAMN05444358_1011508 | Not Available | Positive | 1482709 - 1484106 | 51433.9 |
| diacylglycerol kinase (atp) | SAMN05444358_1011509 | Not Available | Negative | 1484116 - 1484478 | 13099.8 |
| hypothetical protein | SAMN05444358_1011510 | Not Available | Negative | 1484614 - 1484802 | 6574.75 |
| iron-binding zinc finger cdgsh type | SAMN05444358_1011511 | Not Available | Positive | 1485018 - 1485260 | 8745.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
