Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-3-hydroxyaspartate aldolase | SAMN05444358_1011492 | Not Available | Positive | 1466898 - 1468061 | 41895.9 |
| ornithine cyclodeaminase | SAMN05444358_1011493 | Not Available | Positive | 1468137 - 1469102 | 33940.4 |
| myo-inositol-1(or 4)-monophosphatase | SAMN05444358_1011494 | Not Available | Negative | 1469159 - 1469944 | 28376.2 |
| hypothetical protein | SAMN05444358_1011495 | Not Available | Negative | 1469898 - 1470020 | 4531.38 |
| lysr family transcriptional regulator, regulator for mete and meth | SAMN05444358_1011496 | Not Available | Negative | 1470040 - 1470945 | 33982.1 |
| 5,10-methylenetetrahydrofolate reductase (nad(p)) | SAMN05444358_1011497 | Not Available | Positive | 1471040 - 1471906 | 31874.6 |
| hypothetical protein | SAMN05444358_1011498 | Not Available | Positive | 1472108 - 1472770 | 24029.5 |
| yhs domain-containing protein | SAMN05444358_1011499 | Not Available | Negative | 1472831 - 1473349 | 18512.5 |
| gst-like protein | SAMN05444358_1011500 | Not Available | Positive | 1473593 - 1474468 | 32825.6 |
| sseb protein n-terminal domain-containing protein | SAMN05444358_1011501 | Not Available | Negative | 1474478 - 1475266 | 27648.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
