Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 1454021 - 1454094 | Not Available |
| hypothetical protein | SAMN05444358_1011483 | Not Available | Positive | 1454532 - 1456175 | 61381.5 |
| hypothetical protein | SAMN05444358_1011484 | Not Available | Positive | 1456367 - 1458256 | 68148.5 |
| hypothetical protein | SAMN05444358_1011485 | Not Available | Negative | 1458316 - 1458876 | 20051.8 |
| transcriptional regulator, asnc family | SAMN05444358_1011486 | Not Available | Negative | 1458908 - 1459393 | 17902.6 |
| l-proline dehydrogenase /delta-1-pyrroline-5-carboxylate dehydrogenase | SAMN05444358_1011487 | Not Available | Positive | 1459496 - 1462894 | 121626.0 |
| membrane associated serine protease, rhomboid family | SAMN05444358_1011488 | Not Available | Positive | 1462937 - 1463680 | 27341.9 |
| transcriptional regulator, iclr family | SAMN05444358_1011489 | Not Available | Negative | 1463688 - 1464509 | 29786.4 |
| serine-glyoxylate aminotransferase apoenzyme | SAMN05444358_1011490 | Not Available | Positive | 1464713 - 1465903 | 42525.7 |
| threonine dehydratase | SAMN05444358_1011491 | Not Available | Positive | 1465915 - 1466886 | 34932.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
