Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-tyrosyl-trna(tyr) deacylase | SAMN05444358_1011472 | Not Available | Positive | 1441060 - 1441497 | 15099.3 |
| hydroxypyruvate reductase | SAMN05444358_1011473 | Not Available | Positive | 1441497 - 1442600 | 37855.2 |
| peptide/nickel transport system substrate-binding protein | SAMN05444358_1011474 | Not Available | Positive | 1442926 - 1444512 | 57847.0 |
| peptide/nickel transport system permease protein | SAMN05444358_1011475 | Not Available | Positive | 1444528 - 1445484 | 34429.2 |
| peptide/nickel transport system permease protein | SAMN05444358_1011476 | Not Available | Positive | 1445481 - 1446299 | 28881.1 |
| peptide/nickel transport system atp-binding protein | SAMN05444358_1011477 | Not Available | Positive | 1446296 - 1447933 | 59447.6 |
| type i phosphodiesterase / nucleotide pyrophosphatase | SAMN05444358_1011478 | Not Available | Positive | 1448093 - 1448929 | 31302.9 |
| acetyl esterase | SAMN05444358_1011479 | Not Available | Negative | 1448936 - 1449859 | 33781.3 |
| fatty-acyl-coa synthase/long-chain acyl-coa synthetase | SAMN05444358_1011480 | Not Available | Negative | 1449872 - 1451761 | 68886.5 |
| atp-binding cassette, subfamily b | SAMN05444358_1011481 | Not Available | Negative | 1451920 - 1453740 | 65538.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
