Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein, contains gyd domain | SAMN05444358_1011451 | Not Available | Positive | 1424896 - 1425228 | 11173.5 |
| n-acetylmuramoyl-l-alanine amidase | SAMN05444358_1011453 | Not Available | Negative | 1425752 - 1426477 | 26683.6 |
| excalibur calcium-binding domain-containing protein | SAMN05444358_1011454 | Not Available | Negative | 1426422 - 1427129 | 24357.0 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit a | SAMN05444358_1011455 | Not Available | Negative | 1427170 - 1428657 | 52514.4 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit c | SAMN05444358_1011456 | Not Available | Negative | 1428661 - 1428948 | 10441.4 |
| hypothetical protein | SAMN05444358_1011457 | Not Available | Positive | 1429174 - 1429332 | 5501.77 |
| protein of unknown function | SAMN05444358_1011458 | Not Available | Positive | 1429486 - 1430049 | 21197.1 |
| lysophospholipase l1 | SAMN05444358_1011459 | Not Available | Positive | 1430133 - 1430816 | 24415.2 |
| ceramidase | SAMN05444358_1011460 | Not Available | Negative | 1430797 - 1431450 | 24098.2 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN05444358_1011461 | Not Available | Positive | 1431508 - 1432200 | 25074.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
