Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, contains xre-family hth domain | SAMN05444358_1011441 | Not Available | Negative | 1417506 - 1417877 | 14150.0 |
| nadph2:quinone reductase | SAMN05444358_1011442 | Not Available | Positive | 1418215 - 1419183 | 33982.0 |
| transcriptional regulator, lysr family | SAMN05444358_1011443 | Not Available | Negative | 1419167 - 1420045 | 32128.6 |
| protein of unknown function | SAMN05444358_1011444 | Not Available | Positive | 1420173 - 1420391 | 8232.89 |
| hypothetical protein | SAMN05444358_1011445 | Not Available | Positive | 1420587 - 1421324 | 26442.1 |
| hypothetical protein | SAMN05444358_1011446 | Not Available | Negative | 1421586 - 1422110 | 18682.7 |
| hypothetical protein | SAMN05444358_1011447 | Not Available | Negative | 1422232 - 1422510 | 9947.33 |
| hypothetical protein | SAMN05444358_1011448 | Not Available | Negative | 1422871 - 1423236 | 13128.3 |
| hypothetical protein | SAMN05444358_1011449 | Not Available | Negative | 1423625 - 1424143 | 18031.3 |
| lsu ribosomal protein l33p | SAMN05444358_1011450 | Not Available | Negative | 1424358 - 1424525 | 6396.96 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
