Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choline dehydrogenase | SAMN05444358_1011421 | Not Available | Negative | 1394306 - 1395964 | 60502.7 |
| choline-sulfatase | SAMN05444358_1011422 | Not Available | Negative | 1396052 - 1397560 | 57136.8 |
| transcriptional regulator, tetr family | SAMN05444358_1011423 | Not Available | Negative | 1397557 - 1398129 | 21097.9 |
| threonine/homoserine efflux transporter rhta | SAMN05444358_1011424 | Not Available | Negative | 1398203 - 1399132 | 33343.1 |
| l-lysine exporter family protein lyse/argo | SAMN05444358_1011425 | Not Available | Negative | 1399173 - 1399772 | 21550.8 |
| transcriptional regulator, lysr family | SAMN05444358_1011426 | Not Available | Positive | 1399857 - 1400753 | 31875.4 |
| hypothetical protein | SAMN05444358_1011427 | Not Available | Negative | 1400750 - 1401886 | 40372.5 |
| dna-binding regulatory protein, yebc/pmpr family | SAMN05444358_1011428 | Not Available | Negative | 1402196 - 1402936 | 26836.1 |
| trka-c domain-containing protein | SAMN05444358_1011429 | Not Available | Positive | 1403048 - 1404820 | 62698.6 |
| gmp synthase (glutamine-hydrolysing) | SAMN05444358_1011430 | Not Available | Positive | 1404837 - 1405571 | 26612.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
