Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine betaine/proline transport system atp-binding protein | SAMN05444358_1011391 | Not Available | Negative | 1364927 - 1365976 | 38030.7 |
| glycine betaine/proline transport system substrate-binding protein | SAMN05444358_1011392 | Not Available | Negative | 1365987 - 1366937 | 33789.8 |
| dna-3-methyladenine glycosylase i | SAMN05444358_1011393 | Not Available | Positive | 1367271 - 1367933 | 24281.1 |
| hypothetical protein | SAMN05444358_1011394 | Not Available | Positive | 1367976 - 1368662 | 26106.4 |
| cytochrome c, mono-and diheme variants | SAMN05444358_1011395 | Not Available | Negative | 1368668 - 1369075 | 14179.3 |
| transporter family-2 protein | SAMN05444358_1011396 | Not Available | Positive | 1369174 - 1369611 | 14577.5 |
| lipoprotein-releasing system atp-binding protein | SAMN05444358_1011397 | Not Available | Negative | 1369595 - 1370281 | 24273.1 |
| lipoprotein-releasing system permease protein | SAMN05444358_1011398 | Not Available | Negative | 1370274 - 1371560 | 46300.3 |
| hypothetical protein | SAMN05444358_1011399 | Not Available | Positive | 1371951 - 1372307 | 12800.5 |
| prolyl-trna synthetase | SAMN05444358_1011400 | Not Available | Negative | 1372337 - 1373749 | 53404.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
