Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05444358_1011372 | Not Available | Positive | 1349299 - 1350516 | 44350.8 |
| hypothetical protein | SAMN05444358_1011373 | Not Available | Positive | 1350621 - 1351487 | 32000.7 |
| transcriptional regulator, asnc family | SAMN05444358_1011374 | Not Available | Negative | 1351484 - 1351723 | 9072.98 |
| imidazoleglycerol-phosphate dehydratase | SAMN05444358_1011375 | Not Available | Positive | 1351878 - 1352465 | 21537.6 |
| imidazole glycerol phosphate synthase subunit hish | SAMN05444358_1011376 | Not Available | Positive | 1352466 - 1353104 | 23263.7 |
| uncharacterized conserved protein, duf2147 family | SAMN05444358_1011377 | Not Available | Negative | 1353109 - 1353510 | 14100.6 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | SAMN05444358_1011378 | Not Available | Positive | 1353644 - 1354363 | 24854.7 |
| uncharacterized conserved protein, duf302 family | SAMN05444358_1011379 | Not Available | Negative | 1354365 - 1354829 | 16356.7 |
| imidazole glycerol phosphate synthase subunit hisf | SAMN05444358_1011380 | Not Available | Positive | 1354932 - 1355693 | 26464.7 |
| phosphoribosyl-atp pyrophosphatase | SAMN05444358_1011381 | Not Available | Positive | 1355690 - 1356007 | 11234.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
