Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444358_1011352 | Not Available | Positive | 1326907 - 1328085 | 42528.0 |
| hypothetical protein | SAMN05444358_1011353 | Not Available | Negative | 1328109 - 1328483 | 12452.8 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | SAMN05444358_1011354 | Not Available | Negative | 1328587 - 1329990 | 49239.5 |
| predicted atpase | SAMN05444358_1011355 | Not Available | Negative | 1330003 - 1330533 | 19875.5 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | SAMN05444358_1011356 | Not Available | Negative | 1330530 - 1331612 | 38903.4 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | SAMN05444358_1011357 | Not Available | Negative | 1331647 - 1333041 | 48729.4 |
| udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase | SAMN05444358_1011358 | Not Available | Negative | 1333038 - 1334519 | 51811.4 |
| cell division protein ftsi (penicillin-binding protein 3) | SAMN05444358_1011359 | Not Available | Negative | 1334542 - 1336329 | 64396.5 |
| hypothetical protein | SAMN05444358_1011360 | Not Available | Negative | 1336326 - 1336694 | 13874.7 |
| 16s rrna (cytosine1402-n4)-methyltransferase | SAMN05444358_1011361 | Not Available | Negative | 1336691 - 1337683 | 36002.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
