Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative spermidine/putrescine transport system permease protein | SAMN05444358_1011332 | Not Available | Positive | 1304374 - 1305585 | 44091.5 |
| creatinase | SAMN05444358_1011333 | Not Available | Positive | 1305748 - 1306968 | 44490.9 |
| agmatinase | SAMN05444358_1011334 | Not Available | Negative | 1307000 - 1307971 | 34972.0 |
| protein of unknown function | SAMN05444358_1011335 | Not Available | Positive | 1308161 - 1309531 | 51345.4 |
| chloride channel protein, cic family | SAMN05444358_1011336 | Not Available | Negative | 1309532 - 1311217 | 59640.4 |
| dna replication and repair protein recn | SAMN05444358_1011337 | Not Available | Negative | 1311310 - 1312959 | 58355.2 |
| beta-barrel assembly machine subunit bamd | SAMN05444358_1011338 | Not Available | Negative | 1312996 - 1313859 | 32504.7 |
| udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase | SAMN05444358_1011339 | Not Available | Negative | 1313987 - 1314907 | 32743.5 |
| cell division protein ftsz | SAMN05444358_1011340 | Not Available | Negative | 1315121 - 1316728 | 56909.0 |
| hypothetical protein | SAMN05444358_1011341 | Not Available | Negative | 1317078 - 1317401 | 11962.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
