Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444358_1011322 | Not Available | Negative | 1293086 - 1295524 | 73765.6 |
| regulatory protein, luxr family | SAMN05444358_1011323 | Not Available | Positive | 1296138 - 1296899 | 28663.5 |
| hypothetical protein | SAMN05444358_1011324 | Not Available | Positive | 1296892 - 1297389 | 19011.1 |
| Trna-leu | Not Available | Not Available | Positive | 1297398 - 1297483 | Not Available |
| diaminopropionate ammonia-lyase | SAMN05444358_1011326 | Not Available | Positive | 1297700 - 1298743 | 36150.8 |
| xaa-pro aminopeptidase | SAMN05444358_1011327 | Not Available | Positive | 1298740 - 1299885 | 40937.9 |
| maleate isomerase | SAMN05444358_1011328 | Not Available | Positive | 1299882 - 1300595 | 25835.8 |
| putative spermidine/putrescine transport system atp-binding protein | SAMN05444358_1011329 | Not Available | Positive | 1300708 - 1301829 | 41635.0 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN05444358_1011330 | Not Available | Positive | 1301932 - 1303023 | 39597.4 |
| putative spermidine/putrescine transport system permease protein | SAMN05444358_1011331 | Not Available | Positive | 1303094 - 1304368 | 47068.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
