Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidase | SAMN05444358_1011312 | Not Available | Positive | 1281333 - 1282772 | 51381.3 |
| nad+ kinase | SAMN05444358_1011313 | Not Available | Negative | 1283046 - 1283834 | 28553.4 |
| glycine hydroxymethyltransferase | SAMN05444358_1011314 | Not Available | Positive | 1283977 - 1285272 | 45935.6 |
| hypothetical protein | SAMN05444358_1011315 | Not Available | Negative | 1285362 - 1285736 | 14167.7 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444358_1011316 | Not Available | Positive | 1285784 - 1286584 | 29431.3 |
| hypothetical protein | SAMN05444358_1011317 | Not Available | Negative | 1286585 - 1286770 | 6065.77 |
| rhodanese-related sulfurtransferase | SAMN05444358_1011318 | Not Available | Negative | 1286856 - 1287248 | 14091.2 |
| hlyd family secretion protein | SAMN05444358_1011319 | Not Available | Negative | 1287321 - 1288661 | 49587.7 |
| atp-binding cassette, subfamily c | SAMN05444358_1011320 | Not Available | Negative | 1288665 - 1290974 | 82521.4 |
| hypothetical protein | SAMN05444358_1011321 | Not Available | Negative | 1291011 - 1292957 | 70025.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
