Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eama-like transporter family protein | SAMN05444358_1011302 | Not Available | Negative | 1268718 - 1269656 | 33387.3 |
| hypothetical protein | SAMN05444358_1011303 | Not Available | Positive | 1269805 - 1270818 | 36837.1 |
| uracil phosphoribosyltransferase | SAMN05444358_1011304 | Not Available | Negative | 1270822 - 1271454 | 23039.4 |
| adenosine deaminase | SAMN05444358_1011305 | Not Available | Negative | 1271451 - 1272437 | 36103.5 |
| phosphopentomutase | SAMN05444358_1011306 | Not Available | Negative | 1272434 - 1273645 | 43174.7 |
| thymidine phosphorylase | SAMN05444358_1011307 | Not Available | Negative | 1273642 - 1274949 | 44609.5 |
| cytidine deaminase | SAMN05444358_1011308 | Not Available | Negative | 1274954 - 1275346 | 13360.9 |
| cupin domain protein | SAMN05444358_1011309 | Not Available | Negative | 1275442 - 1276554 | 41773.8 |
| malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+) | SAMN05444358_1011310 | Not Available | Positive | 1276761 - 1279034 | 81857.6 |
| propionyl-coa synthetase | SAMN05444358_1011311 | Not Available | Positive | 1279302 - 1281191 | 68786.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
