Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalt-precorrin 5a hydrolase | SAMN05444358_1011262 | Not Available | Positive | 1227802 - 1228170 | 12190.3 |
| precorrin-4 c11-methyltransferase | SAMN05444358_1011263 | Not Available | Positive | 1228167 - 1228961 | 28000.4 |
| hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) /cobyrinate a,c-diamide synthase | SAMN05444358_1011264 | Not Available | Positive | 1228954 - 1230270 | 45970.9 |
| uroporphyrinogen-iii c-methyltransferase | SAMN05444358_1011265 | Not Available | Positive | 1230267 - 1230995 | 25394.6 |
| precorrin-6a synthase (deacetylating) | SAMN05444358_1011266 | Not Available | Positive | 1230988 - 1231755 | 27981.4 |
| uncharacterized conserved protein, duf302 family | SAMN05444358_1011267 | Not Available | Positive | 1231814 - 1232278 | 16592.7 |
| acetolactate synthase-1/2/3 large subunit | SAMN05444358_1011268 | Not Available | Positive | 1232358 - 1233977 | 58116.8 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05444358_1011269 | Not Available | Positive | 1233964 - 1235148 | 41883.7 |
| hypothetical protein | SAMN05444358_1011270 | Not Available | Positive | 1235329 - 1236699 | 50387.6 |
| hypothetical protein | SAMN05444358_1011271 | Not Available | Positive | 1236733 - 1237950 | 45710.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
