Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyisobutyrate dehydrogenase | SAMN05444358_1011251 | Not Available | Negative | 1216512 - 1217471 | 33963.9 |
| predicted metal-binding protein | SAMN05444358_1011253 | Not Available | Positive | 1217908 - 1218297 | 14359.2 |
| cobalamin biosynthesis protein cobw | SAMN05444358_1011254 | Not Available | Positive | 1218294 - 1219349 | 37890.4 |
| cobaltochelatase cobn subunit | SAMN05444358_1011255 | Not Available | Positive | 1219353 - 1222646 | 119225.0 |
| precorrin-3b synthase | SAMN05444358_1011256 | Not Available | Positive | 1222643 - 1223770 | 39985.1 |
| precorrin-8x methylmutase | SAMN05444358_1011257 | Not Available | Positive | 1223770 - 1224399 | 22316.8 |
| precorrin-2 c20-methyltransferase | SAMN05444358_1011258 | Not Available | Positive | 1224396 - 1225124 | 26944.6 |
| precorrin-3 methyltransferase | SAMN05444358_1011259 | Not Available | Positive | 1225121 - 1225885 | 27459.0 |
| precorrin-6a reductase | SAMN05444358_1011260 | Not Available | Negative | 1225876 - 1226607 | 25999.1 |
| precorrin-6y c5,15-methyltransferase (decarboxylating) | SAMN05444358_1011261 | Not Available | Positive | 1226708 - 1227805 | 39063.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
