Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter, dctm subunit | SAMN05444358_1011231 | Not Available | Negative | 1198695 - 1200014 | 47820.0 |
| trap-type mannitol/chloroaromatic compound transport system, small permease component | SAMN05444358_1011232 | Not Available | Negative | 1200011 - 1200592 | 22141.4 |
| predicted n-formylglutamate amidohydrolase | SAMN05444358_1011233 | Not Available | Negative | 1200589 - 1201377 | 28792.4 |
| transcriptional regulator, rpir family | SAMN05444358_1011234 | Not Available | Positive | 1201500 - 1202369 | 33071.8 |
| hypothetical protein | SAMN05444358_1011235 | Not Available | Positive | 1202451 - 1203338 | 32175.4 |
| transferase 2, rsam/selenodomain-associated | SAMN05444358_1011236 | Not Available | Negative | 1203214 - 1203888 | 24592.6 |
| hypothetical protein | SAMN05444358_1011237 | Not Available | Positive | 1203962 - 1204699 | 26737.9 |
| hypothetical protein | SAMN05444358_1011238 | Not Available | Positive | 1204806 - 1205741 | 34036.2 |
| translation elongation factor p (ef-p) | SAMN05444358_1011239 | Not Available | Negative | 1205786 - 1206349 | 20957.1 |
| hypothetical protein | SAMN05444358_1011240 | Not Available | Positive | 1206569 - 1206889 | 11538.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
