Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protease ydgd | SAMN05444358_1011191 | Not Available | Negative | 1163011 - 1163787 | 27258.7 |
| polyhydroxyalkanoate synthesis repressor phar | SAMN05444358_1011192 | Not Available | Negative | 1163795 - 1164349 | 20790.9 |
| phasin protein | SAMN05444358_1011193 | Not Available | Negative | 1164487 - 1164933 | 15360.1 |
| polyhydroxyalkanoate synthase | SAMN05444358_1011194 | Not Available | Negative | 1165066 - 1166868 | 67531.3 |
| poly(3-hydroxybutyrate) depolymerase | SAMN05444358_1011195 | Not Available | Positive | 1166980 - 1168251 | 47523.8 |
| hypothetical protein | SAMN05444358_1011196 | Not Available | Positive | 1168248 - 1168832 | 21590.2 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444358_1011197 | Not Available | Negative | 1168829 - 1169539 | 25885.9 |
| hypothetical protein | SAMN05444358_1011198 | Not Available | Negative | 1169613 - 1170245 | 24559.1 |
| hypothetical protein | SAMN05444358_1011199 | Not Available | Negative | 1170248 - 1170673 | 15393.2 |
| esterase/lipase | SAMN05444358_1011200 | Not Available | Negative | 1170673 - 1171665 | 36006.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
