Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative / gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Crambe crambe |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
921858 bp
Thymine Count
924279 bp
Guanine Count
1199491 bp
Cytosine Count
1198040 bp
Genome Length
4243668 bp
Protein-coding Genes
4188 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | SAMN05444358_1011151 | Not Available | Positive | 1128157 - 1128819 | 25096.8 |
| hypothetical protein | SAMN05444358_1011152 | Not Available | Negative | 1128795 - 1129190 | 14954.8 |
| uncharacterized membrane protein yhhn | SAMN05444358_1011153 | Not Available | Positive | 1129341 - 1129979 | 22299.2 |
| signal recognition particle-docking protein ftsy | SAMN05444358_1011154 | Not Available | Positive | 1130038 - 1131177 | 40523.5 |
| uncharacterized membrane protein | SAMN05444358_1011155 | Not Available | Positive | 1131222 - 1132166 | 34125.6 |
| intracellular septation protein | SAMN05444358_1011156 | Not Available | Positive | 1132183 - 1132788 | 23114.9 |
| transcriptional regulator, crp/fnr family | SAMN05444358_1011157 | Not Available | Positive | 1132898 - 1133566 | 24502.7 |
| catechol 2,3-dioxygenase | SAMN05444358_1011158 | Not Available | Positive | 1133926 - 1134342 | 14796.1 |
| serine protease do | SAMN05444358_1011159 | Not Available | Negative | 1134468 - 1135961 | 53102.6 |
| hypothetical protein | SAMN05444358_1011160 | Not Available | Negative | 1136093 - 1136287 | 6973.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
